Sasami meets a new girl named MIsao and becomes her friend. When Misao takes Ryo-Ohki from the new school nurse, Washu, the girls get lost underground, where they learn of each other's magic.

Misao and Sasami learn about their heritage, with a new person joining them in the Magical Girls Club: Makato. However, she learns the hard way to be careful about her decisions.

A marathon is held at the school to celebrate the long-awaited return of Tsukasa, a popular student, to the campus. When she vanishes not long afterward, Sasami travels to the house of Tsukasa to find out the reason for her disappearance.

Anri realizes that anything she writes in the magic notebook she has, appears in real life. However, since she has only been writing colorful insults as of late, these hang overtop Sasami and her friends.

Sasami realizes she needs permission from a parent so she can go on a field trip to the World of the Witches, but her father refuses to give permission. She hopes that he will change his mind before the train leaves the station.

The adventure in the World of Witches continues, with Sasami meeting a boy named Amitav who seems to know about her. The loneliness of Misao fades away when she meets other lonely girls in this world!

After Sasami thinks about Amitav after completing a school assignment, she and Misao travel to the World of the Witches again. However, a friend has to save them when they get lost.

Miso, while at the Niko-Niko Bazaar, she realizes she is working with Kozue and Chiaki. While it is a good way to know the friends of Sasami, Misao keeps messing up again and again!

The job of Ms. Washu is challenged after Mr. Tonobe does an investigation of the Cooking Club. Sasami and the girls come to the rescue, hoping to save her with their culinary skills.

While Asami wants to be an apprentice for the Magical Girls Club, and when Sasami and the other members of the group learn why, they attempt to reunite Asami with her deceased parents.

Sasami and her friends are invited to be part of the Magical Girls Tournament. Their excitement for this wanes and fades when the grueling sessions ordered by Ms. Washu test their friendship.

Misao becomes torn between her loyalty to the Magical Girls Club and Monta, with her emotional issues possibly causing her friends to be unable to attend the Magical Girls Tournament!

While the team of Sasami is behind, they have one event remaining, struggling to cover, with magic, the bare branches of a tree with blossoms of happiness and love, the father of Sasami gives Ms. Washu news which startles her.